Thursday, March 17, 2011

Why are fruit flies important for us?

Audio slideshow screenshots
Clockwise: A normal fruit fly next to another with a liver disease, white-eyed mutant flies feeding, a collage of epifluorescence images of flies internal organs or systems, and a fruit fly brain with neurons that control mating, fluorescing in green

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Research in fruit flies, Drosophila, specially D. melanogaster, has been fundamental for enhancing our knowledge of genetics as a whole and of human genetics in particular, since we share about 60% of our genes with them. In lab we have used software that simulates controlled crosses of fruit flies with specific mutations, and in the next few weeks we will perform more complex simulations.

But fruit flies are also used in other areas of research. Check out this audio slideshow, produced by the BBC, on the use of fruit flies in neurophysiology research. Some of the general principles outlined by the researcher apply to genetics research too. The system to breed the flies (jars with growth media, covered with cotton or gauze) is the same as in genetics research.

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Wednesday, March 16, 2011

Lecture, chapter 4 - Pedigree analysis

Today we started chapter 3, on pedigree analysis.

We discussed the reasons for which human Mendelian genetics has been traditionally studied with pedigrees rather than with more direct approaches, and what are the shortcomings of doing so.

We also listed the six modes of inheritance and described two of them: Autosomal dominant and autosomal recessive. We discussed examples of each: Cystic fibrosis and sickle cell anemia (autosomal recessive) and Marfan syndrome (autosomal dominant).

I also introduced the catalog that stores information on human Mendelian traits: Online Mendelian Inheritance In Man (OMIM). [OMIM in Wikipedia]

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Tuesday, March 15, 2011

Lab 02 - Mendelian genetics


Today we completed lab 2, in which principles of mendelian genetics were studied through computer simulations of fruit fly (Drosophila melanogaster) crosses.

We used DrosophiLab to simulate crosses between wild type flies and mutants for the autosomal genes vestigial wings and sepia eyes, and the X-linked gene white eyes (test crosses). By doing so students were able to demonstrate the principles of segregation and independent assortment
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Monday, March 14, 2011

Chapter 3 - Mendelian genetics


Mendel, in his garden in the 1880s
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Between Friday and today we covered the chapter on Mendelian genetics.

We discussed how Mendel performed the experiments with pea plants that led him to propose his principles of segregation and independent assortment, laying the foundation of the field of genetics.

We then discussed the apparent deviations from Mendel's principles that are observed in organisms with complex phenotypes. The genes responsible for such phenotypes do, indeed, follow Mendelian principles, but the phenotypic proportions are different from those Mendel observed. The cases we discussed were:
  • Incomplete dominance
  • Codominance
  • Multiple alleles
  • Gene interactions (including epistasis)
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